#include <Wire.h>
#include <RotaryEncoder.h>
#include <FlexiTimer2.h>
#include <EEPROM.h>
#include <U8g2lib.h>
#include <avr/wdt.h>
#include <NeoHWSerial.h>

#include "config.h"
#include "fonts.h"

#define VERSION "V:1.2A"

byte memCode = 'd'; //Change to different letter if you changed the data structure

uint16_t CV1Calibration = 512;
uint16_t CV2Calibration = 512;
bool showDone = false;

const int subDivs[20] = { -24, -12, -8, -6, -4, -3, -2, 1, 2, 3, 4, 5, 6, 7, 8, 16, 24, 32, 64, 128 };  //positive - divide, negative - multiply, 0 - off

byte bpm = 130;
byte bpmModulationChannel = 200;  //0 - CV1, 1 - CV2, 255 - OFF
byte bpmModulationRange = 0;

struct channel {
  byte mode       : 3; //mv: 7. 0 - CLK, 1 - RND, 2 - SEQ, 3 - SWING, 4 - Gate
  byte subDiv     : 5; //mv: 32
  byte random     : 4; //mv: 16
  byte seqPattern : 4;
  byte CV1Target  : 3; //0 - Off, 1 - Subdiv, 2 - RND, 3 - SeqPattern
  byte CV2Target  : 3;
  uint8_t swing   : 3;
  uint8_t offset  : 7; //mv: 128
  uint8_t gate    : 6; //mv: 64
};

channel channels[6] = {  //array of channel settings
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 },
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 },
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 },
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 },
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 },
  { 0, 7, 0, 0, 0, 0, 0, 0, 0 }
};

bool seqA1[16] = {1, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 1, 0, 0, 1}; //switch to struct seqs { uint32_t sequence; uint8_t length : 5 ; uint8_t currentStep : 5}. test with lengthOf
bool seqA2[16] = {0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0};
bool seqA3[16] = {1, 0, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0};
bool seqA4[16] = {0, 0, 1, 1, 0, 0, 1, 1, 0, 0, 1, 1, 0, 0, 1, 1};
bool seqA5[16] = {0, 1, 1, 1, 0, 1, 1, 1, 0, 1, 1, 1, 0, 1, 1, 1};
bool seqA6[16] = {0, 0, 1, 0, 1, 0, 1, 0, 0, 0, 1, 0, 1, 0, 1, 0};
bool seqA7[16] = {1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 0};
bool seqA8[16] = {1, 1, 0, 0, 1, 1, 0, 0, 1, 1, 1, 0, 1, 1, 0, 1};
bool seqB1[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB2[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB3[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB4[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB5[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB6[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB7[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
bool seqB8[16] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0};
byte currentStep = 0;
byte stepNumSelected = 0;
bool *patternToEdit;

unsigned int channelPulseCount[6];
unsigned int channelPulsesPerCycle[6];
byte sixteenthPulseCount = 0;
int playingModes[6];  // should be renamed to currentSubdivs or something. Updated from channels object on beat and with applied CV modulation
int playingModesOld[6];

unsigned int pulsePeriod;  
bool isPlaying;// = false; // replace to something like byte status where 1xxxxxx isPlaying, x1xxxxx isRecording etc
bool isRecording = false;
bool recordToNextStep = false;
bool MIDIClockReceived = false;

unsigned int tickCount = 0;
unsigned int pulseCount = 0;

byte masterClockMode = 0;  // 0 - internal, 1 - external 24ppqn, 2 - MIDI
byte extClockPPQN = 0; // 0 - 24, 1 - 4 (1/16)
unsigned long lastExtPulseTime = 0;
unsigned long newExtPulseTime = 0;

bool needPulseReset[6] = { true, true, true, true, true, true };
int gatePulseCount[6] = {0,0,0,0,0,0};
bool stepIsOdd = 1;

byte displayTab = 0;
bool insideTab = false;
byte menuItem = 0;
bool menuItemSelected = false;
byte lastMenuItem = 3;
byte displayScreen = 0; //0 - main, 1 - sequencer, 2 - settings

bool playBtnPushed = false;
bool shiftBtnPushed = false;

int CV1Input = 0;
int CV2Input = 0;

int encPositionOld = 0;
int encDirectionOld = 0;
unsigned long encPressedTime;
unsigned long encReleasedTime;
unsigned long playPressedTime;
unsigned long playReleasedTime;
unsigned long shiftPressedTime;
unsigned long shiftReleasedTime;
bool encBtnPushed;

int extResetCountdown;
int extTriggerCount;

//unsigned long lastInteractionTime;  // used for display timeout

U8G2_SSD1306_128X64_NONAME_2_HW_I2C u8g2(U8G2_R2, SCL, SDA, U8X8_PIN_NONE); 
RotaryEncoder encoder(ENC_D1_PIN, ENC_D2_PIN, RotaryEncoder::LatchMode::TWO03);


  
String version;

void setup() {
  version = F(VERSION);

  NeoSerial.begin(31250);
  NeoSerial.attachInterrupt(receiveMIDI);

  pinMode(ENC_BTN_PIN, INPUT_PULLUP);
  pinMode(START_STOP_BTN_PIN, INPUT_PULLUP);
  pinMode(SHIFT_BTN_PIN, INPUT_PULLUP);
  pinMode(EXT_INPUT_PIN, INPUT_PULLUP);
  attachInterrupt(digitalPinToInterrupt(EXT_INPUT_PIN), externalClock, FALLING);

  for (byte i = 0; i < 6; i++) {
    pinMode(outsPins[i], OUTPUT);
  }

  pinMode(clockOutPin, OUTPUT);

  loadState();

  u8g2.begin();
  checkScreenRotation();
  updateScreen();

  calculateCycles();
  calculateBPMTiming();

  resetClocks();

  FlexiTimer2::set(1, 1.0 / 10000, clock);  // 1.0/1000 = 1ms period. If other than 1ms calculateBPMTiming() might need tweaking
  FlexiTimer2::start();
}

void loop() {
  if (masterClockMode == 1 && extClockPPQN == 1) {
    calculateBPMTiming();
  } 
  checkInputs();
}

void sendMIDIClock() {
  NeoSerial.write(0xF8);
}
void sendMIDIStart() {
  NeoSerial.write(0xFA);
}
void sendMIDIStop() {
  NeoSerial.write(0xFC);
}

void receiveMIDI( uint8_t msg, uint8_t status ) {
  if (masterClockMode == 2) {
    if (msg == 0xF8) { //Clock
      MIDIClockReceived = true;
    } else if (msg == 0xFC) { //stop
      isPlaying = false;
    } else if (msg == 0xFA || msg == 0xFB) { //start and continue
      isPlaying = true;
    } 
  }
}


void clock() {
  if (isPlaying) {

    // Action on each pulse
    if (tickCount == 0) {
      sendTriggers();
      digitalWrite(clockOutPin, HIGH);
      sendMIDIClock();
    }

    //this part gets the Pulse and Ticks ticking
    //it's placed after the triggers to avoid problems on the start (when pulseCount==0)
    tickCount++;
    if (masterClockMode == 0) {
      if (tickCount >= pulsePeriod) {
        tickCount = 0;
        if (pulseCount < (PPQN - 1)) {  //-1 is here to avoid extra IF to reset to 0
          pulseCount++;
        } else {
          pulseCount = 0;
        }
        if (bpmModulationRange != 0) {
          calculateBPMTiming();
        }
      }
    }
    if (masterClockMode == 1 && extClockPPQN == 1) {
      if (tickCount >= pulsePeriod && pulseCount < (PPQN - 1)) {  // ((6 * (extTriggerCount + 1)) - 1)) { //this formula puts it out of sync, so there's PPQN-1 for now
        tickCount = 0;
        pulseCount++;
      }
    }

    if (masterClockMode == 2 && MIDIClockReceived) {  // MIDI should happen here (needs testing)
      tickCount = 0;  //to make things happen in the main clock function
      if (pulseCount < (PPQN - 1)) {
        pulseCount++;
      } else {
        pulseCount = 0;
      }
      MIDIClockReceived = false;
    }

    // pull low all outputs after set pulse length
    if (tickCount >= PULSE_LENGTH) {
      for (byte i = 0; i < 6; i++) {
        if (channels[i].mode != 4) { //everything but gate mode
          digitalWrite(outsPins[i], LOW);
        } 
      }
      digitalWrite(clockOutPin, LOW);
    }
  }
}

void externalClock() {
  lastExtPulseTime = newExtPulseTime;
  newExtPulseTime = millis();

  if (masterClockMode == 1 && extClockPPQN == 0) {  // EXT 24ppqn
    if (!isPlaying) {
      isPlaying = true;
    }

    //reset cycles if there were no pulses for a while
    if ((newExtPulseTime - lastExtPulseTime) > 125) {  //125ms is 20bpm

      resetClocks();
    }

    tickCount = 0;  //to make things happen in the main clock function
    if (pulseCount < (PPQN - 1)) {
      pulseCount++;
    } else {
      pulseCount = 0;
    }
  } else if (masterClockMode == 1 && extClockPPQN == 1) { //EXT 1/16
    if (!isPlaying) {
      isPlaying = true;
    }
    if ((newExtPulseTime - lastExtPulseTime) > 750) {
      resetClocks();
      extResetCountdown = 0;
      extTriggerCount = 0;
    }

    if (extTriggerCount == 0) {  //happens on beat
      pulseCount = 0;
      tickCount = 0;
    }
    if (extTriggerCount < 3) {
      extTriggerCount++;
    } else {
      extTriggerCount = 0;
    }

    if (extResetCountdown < 4) {  //reset on the second beat (5th pulse), so that BPM is already calculated correctly
      extResetCountdown++;
    } else if (extResetCountdown == 4) {
      resetClocks();
      extResetCountdown++;  //to get out of the loop
    }
  }
}

void sendTriggers() { //rename to onPulse or something

  for (byte i = 0; i < 6; i++) {
    if (playingModes[i] != subDivs[channels[i].subDiv] && playingModesOld[i] != playingModes[i]) {
      needPulseReset[i] = true;
      playingModesOld[i] = playingModes[i];
    }
  }
  //16th notes for sequencer and swing
  if (sixteenthPulseCount == 0) {
    bool *currentSeq;
    stepIsOdd = !stepIsOdd;
    for (byte i = 0; i < 6; i++) {

      //pattern modulation
      int seqMod = 0;
      byte seqPattern;
      if (channels[i].CV2Target == 3) {
        seqMod = map(CV2Input, -1, 1024, -8, 8); //-1 and 1024 are to try to make the last step not at max value (should make the range from -7 to +7)
      } else if (channels[i].CV1Target == 3) {
        seqMod = map(CV1Input, -1, 1024, -8, 8);
      }
      if (channels[i].seqPattern < 8 && channels[i].seqPattern + seqMod >= 8) {
        seqPattern = 7;
      } else if (channels[i].seqPattern < 8 && channels[i].seqPattern + seqMod < 0) {
        seqPattern = 0;
      } else if (channels[i].seqPattern >= 8 && channels[i].seqPattern + seqMod < 8) {
        seqPattern = 8;
      } else if (channels[i].seqPattern >= 8 && channels[i].seqPattern + seqMod >= 16) {
        seqPattern = 15;
      } else {
        seqPattern = channels[i].seqPattern + seqMod;
      }

      if (seqPattern == 0) {
        currentSeq = seqA1;
      } else if (seqPattern == 1) {
        currentSeq = seqA2;
      } else if (seqPattern == 2) {
        currentSeq = seqA3;
      } else if (seqPattern == 3) {
        currentSeq = seqA4;
      } else if (seqPattern == 4) {
        currentSeq = seqA5;
      } else if (seqPattern == 5) {
        currentSeq = seqA6;
      } else if (seqPattern == 6) {
        currentSeq = seqA7;
      } else if (seqPattern == 7) {
        currentSeq = seqA8;
      } else if (seqPattern == 8) {
        currentSeq = seqB1;
      } else if (seqPattern == 9) {
        currentSeq = seqB2;
      } else if (seqPattern== 10) {
        currentSeq = seqB3;
      } else if (seqPattern == 11) {
        currentSeq = seqB4;
      } else if (seqPattern == 12) {
        currentSeq = seqB5;
      } else if (seqPattern == 13) {
        currentSeq = seqB6;
      } else if (seqPattern == 14) {
        currentSeq = seqB7;
      } else if (seqPattern == 15) {
        currentSeq = seqB8;
      }
      if (channels[i].mode == 2 && currentSeq[currentStep]) {
        digitalWrite(outsPins[i], HIGH);
      }
    }
  }
  if (sixteenthPulseCount < (PPQN / 4) - 1) {
    sixteenthPulseCount++;
    if (sixteenthPulseCount > 3) { //quantization. might need fine-tuning
      recordToNextStep = true;
    }
  } else {
    sixteenthPulseCount = 0;
    if (currentStep < 15) { 
      currentStep ++;
    } else {
      currentStep = 0;
    }
    recordToNextStep = false;
  }

  //switching modes on the beat and resetting channel clock
  if (pulseCount == 0) {
    calculateCycles();
    for (byte i = 0; i < 6; i++) {
      if (needPulseReset[i] == true) {
        channelPulseCount[i] = 0;
        needPulseReset[i] = false;
      }
    }
  }

  //multiplier
  for (byte i = 0; i < 6; i++) {
    
    //RND modulation
    byte randMod = 0;
    if (channels[i].CV1Target == 2) {
      randMod = randMod + CV1Input;
    }
    if (channels[i].CV2Target == 2) {
      randMod = randMod + CV2Input;
    }
    if (channels[i].CV1Target == 2 || channels[i].CV2Target == 2) {
      randMod = map(randMod, 0, 1023, -5, +5);
    }
    byte randAmount = channels[i].random + randMod;
    if (randAmount > 100) {
      randAmount = 0;
    } else if (randAmount > 10) {
      randAmount = 10;
    }

    if (channels[i].mode == 4) { //Gate mode turning off
      gatePulseCount[i]++;
      if (gatePulseCount[i] > channels[i].gate) { 
        digitalWrite(outsPins[i], LOW);
      }
    }

    if ((channels[i].mode == 3 && channelPulseCount[i] == 0 && stepIsOdd == 0)
     || (channels[i].mode == 3 && channelPulseCount[i] == channels[i].swing && stepIsOdd == 1) //swing 
       ) {
        digitalWrite(outsPins[i], HIGH);
    }

    if ((channels[i].mode == 0 && channelPulseCount[i] == channels[i].offset) //CLK with offset
     || (channels[i].mode == 1 && channelPulseCount[i] == 0 && (random(10) + 1) > randAmount) //RND
     || (channels[i].mode == 4 && channelPulseCount[i] == 0) //Gate
       ) {
        digitalWrite(outsPins[i], HIGH);
        gatePulseCount[i] = 0; //reset gate here to avoid length "countdown" effect
    }
    if (channelPulseCount[i] < channelPulsesPerCycle[i]) {
      channelPulseCount[i]++;
    } else {
      channelPulseCount[i] = 0;
    }
  }
}

void calculateCycles() {

  for (byte i = 0; i < 6; i++) {
    int mod = 0; //subdiv modulation happens here
    if (channels[i].CV1Target == 1) { 
      mod = map(CV1Input, -1, 1024, -5, 5);
    } else if (channels[i].CV2Target == 1) {
      mod = map(CV2Input, -1, 1024, -5, 5);
    }
    playingModes[i] = subDivs[channels[i].subDiv - mod];  //subtracting because the innitial array is backwards

    if (channels[i].mode == 2 || channels[i].mode == 3) { //Sequencer and swing plays 1/16th
      channelPulsesPerCycle[i] = (PPQN / 4) - 1;
    } else if (playingModes[i] > 0) {
      channelPulsesPerCycle[i] = (playingModes[i] * PPQN) - 1;
    } else if (playingModes[i] < 0)  {
      channelPulsesPerCycle[i] = (PPQN / abs(playingModes[i])) - 1;
    }

  }
}

void calculateBPMTiming() {
  int mod = 0;
  if (masterClockMode == 0) {  //Internal clock
    if (bpmModulationRange != 0 && bpmModulationChannel == 0) {
      mod = map(CV1Input, 0, 1023, bpmModulationRange * -10, bpmModulationRange * 10);
    } else if (bpmModulationRange != 0 && bpmModulationChannel == 1) {
      mod = map(CV2Input, 0, 1023, bpmModulationRange * -10, bpmModulationRange * 10);
    }
    byte calcbpm = bpm + mod;
    if (calcbpm > MAXBPM) { calcbpm = MAXBPM; };
    pulsePeriod = 600000 / (calcbpm * PPQN);

  } else if (masterClockMode == 1 && extClockPPQN == 1) {  //for ext 1/16 clock (hardcoded)
    pulsePeriod = (newExtPulseTime - lastExtPulseTime) / 6;
  }
}

void resetClocks() {
  for (byte i = 0; i < 6; i++) {
    channelPulseCount[i] = 0;
    digitalWrite(outsPins[i], LOW);  //to avoid stuck leds
  }
  pulseCount = 0;
  tickCount = 0;
  sixteenthPulseCount = 0;
  currentStep = 0;
  stepIsOdd = 1;
}

void saveState() {
  int addr = 0;
  EEPROM.put(addr, bpm);
  addr = addr + sizeof(bpm);
  EEPROM.put(addr, bpmModulationChannel);
  addr = addr + sizeof(bpmModulationChannel);
  EEPROM.put(addr, bpmModulationRange);
  addr = addr + sizeof(bpmModulationRange);
  EEPROM.put(addr, masterClockMode);
  addr = addr + sizeof(masterClockMode);
  EEPROM.put(addr, channels);
  addr = addr + sizeof(channels);
  EEPROM.put(addr, seqA1);
  addr = addr + sizeof(seqA1);
  EEPROM.put(addr, seqA2);
  addr = addr + sizeof(seqA2);
  EEPROM.put(addr, seqA3);
  addr = addr + sizeof(seqA3);
  EEPROM.put(addr, seqA4);
  addr = addr + sizeof(seqA4);
  EEPROM.put(addr, seqA5);
  addr = addr + sizeof(seqA5);
  EEPROM.put(addr, seqA6);
  addr = addr + sizeof(seqA6);
  EEPROM.put(addr, seqA7);
  addr = addr + sizeof(seqA7);
  EEPROM.put(addr, seqA8);
  addr = addr + sizeof(seqA8);
  EEPROM.put(addr, seqB1);
  addr = addr + sizeof(seqB1);
  EEPROM.put(addr, seqB2);
  addr = addr + sizeof(seqB2);
  EEPROM.put(addr, seqB3);
  addr = addr + sizeof(seqB3);
  EEPROM.put(addr, seqB4);
  addr = addr + sizeof(seqB4);
  EEPROM.put(addr, seqB5);
  addr = addr + sizeof(seqB5);
  EEPROM.put(addr, seqB6);
  addr = addr + sizeof(seqB6);
  EEPROM.put(addr, seqB7);
  addr = addr + sizeof(seqB7);
  EEPROM.put(addr, seqB8);
  addr = addr + sizeof(seqB8);
  EEPROM.put(addr, CV1Calibration);
  addr = addr + sizeof(CV1Calibration);
  EEPROM.put(addr, CV2Calibration);
  addr = addr + sizeof(CV2Calibration);
  EEPROM.put(addr, rotateScreen);
  addr = addr + sizeof(rotateScreen);
  EEPROM.put(addr, extClockPPQN);
  addr = addr + sizeof(extClockPPQN);
  EEPROM.put(addr, reverseEnc);
}

void loadState() {
  //check last bit in eeprom to know if the correct settings were stored
  if (EEPROM.read(1023) == memCode) {
    int addr = 0;
    EEPROM.get(addr, bpm);
    addr = addr + sizeof(bpm);
    EEPROM.get(addr, bpmModulationChannel);
    addr = addr + sizeof(bpmModulationChannel);
    EEPROM.get(addr, bpmModulationRange);
    addr = addr + sizeof(bpmModulationRange);
    EEPROM.get(addr, masterClockMode);
    addr = addr + sizeof(masterClockMode);
    EEPROM.get(addr, channels);
    addr = addr + sizeof(channels);
    EEPROM.get(addr, seqA1);
    addr = addr + sizeof(seqA1);
    EEPROM.get(addr, seqA2);
    addr = addr + sizeof(seqA2);
    EEPROM.get(addr, seqA3);
    addr = addr + sizeof(seqA3);
    EEPROM.get(addr, seqA4);
    addr = addr + sizeof(seqA4);
    EEPROM.get(addr, seqA5);
    addr = addr + sizeof(seqA5);
    EEPROM.get(addr, seqA6);
    addr = addr + sizeof(seqA6);
    EEPROM.get(addr, seqA7);
    addr = addr + sizeof(seqA7);
    EEPROM.get(addr, seqA8);
    addr = addr + sizeof(seqA8);
    EEPROM.get(addr, seqB1);
    addr = addr + sizeof(seqB1);
    EEPROM.get(addr, seqB2);
    addr = addr + sizeof(seqB2);
    EEPROM.get(addr, seqB3);
    addr = addr + sizeof(seqB3);
    EEPROM.get(addr, seqB4);
    addr = addr + sizeof(seqB4);
    EEPROM.get(addr, seqB5);
    addr = addr + sizeof(seqB5);
    EEPROM.get(addr, seqB6);
    addr = addr + sizeof(seqB6);
    EEPROM.get(addr, seqB7);
    addr = addr + sizeof(seqB7);
    EEPROM.get(addr, seqB8);
    addr = addr + sizeof(seqB8);
    EEPROM.get(addr, CV1Calibration);
    addr = addr + sizeof(CV1Calibration);
    EEPROM.get(addr, CV2Calibration);
    addr = addr + sizeof(CV2Calibration);
    EEPROM.get(addr, rotateScreen);
    addr = addr + sizeof(rotateScreen);
    EEPROM.get(addr, extClockPPQN);
    addr = addr + sizeof(extClockPPQN);
    EEPROM.get(addr, reverseEnc);
  } else {
    saveState(); //write default values to EEPROM
    EEPROM.write(1023, memCode);
  }
}

void reboot() {
  wdt_enable(WDTO_15MS); //reboot after 15ms
  while(true);
}

void calibrateCVs() {
  CV1Calibration = analogRead(ANALOGUE_INPUT_1_PIN);
  CV2Calibration = analogRead(ANALOGUE_INPUT_2_PIN);
  saveState();
  showDone = true;
  updateScreen();
}

void checkScreenRotation() {
  if (rotateScreen) {
    u8g2.setDisplayRotation(U8G2_R0);
  } else {
    u8g2.setDisplayRotation(U8G2_R2);
  }
}